Doctoral Program in Computer Science
365 5th Avenue
New York City 10016
Room 4319
Phone: 212.817.8190
Fax: 212.817.1510
compsci@gc.cuny.edu
  Click here to go to the Graduate Center main page.

Computer Science Colloquium
 


Thursday, April 22, 4:15pm, room 9204/9205
 
Jose-Maria Carazo  
(Centro Nacional de Biotecnologia-CSIC)
 
"In the Quest of Order: The role of pattern recognition in microscopy image analysis"
 
Nowadays it is becoming more and more common that our capacity to produce raw data is greater than our capacity to analyze them; this happens, for example, in genomics. Structural determination, and in particular electron microscopy, is no exception. Many images in many different settings can be acquired about a given specimen, and the questions then emerge: "What are all these pictures telling us about the specimen?" and "Can we find relationships among the images that convey us new information?".

I will concentrate on the Life Sciences, analyzing in particular the case of three-dimensional electron microscopy (3D EM) of non-crystalline specimen, where the analysis of tens of thousands of very noisy images is required in order to get an estimation about the three-dimensional structure of the specimen. Robust pattern recognition approaches are needed in the 3D EM field. I will review some of them, presenting a number of novel contributions that we have developed within the Biocomputing Unit of the National Center for Biotechnology in Madrid.

 
The Colloquium is supported by generous contributions from the CUNY Faculty Development Program, Bloomberg, Information Builders, Inc. and qbt Systems, Inc.